Package: DBTCShiny 0.1.3

DBTCShiny: Dada-BLAST-Taxon Assign-Condense Metabarcode Analysis 'shiny' Application

Metabarcoding analysis using the 'DBTC' package is implemented here using 'shiny' in an interactive graphical user interface to conduct Metabarcode analyses and visualize and filter results.

Authors:Robert G Young [aut, cre, cph]

DBTCShiny_0.1.3.tar.gz
DBTCShiny_0.1.3.zip(r-4.5)DBTCShiny_0.1.3.zip(r-4.4)DBTCShiny_0.1.3.zip(r-4.3)
DBTCShiny_0.1.3.tgz(r-4.5-any)DBTCShiny_0.1.3.tgz(r-4.4-any)
DBTCShiny_0.1.3.tar.gz(r-4.5-noble)DBTCShiny_0.1.3.tar.gz(r-4.4-noble)
DBTCShiny_0.1.3.tgz(r-4.4-emscripten)DBTCShiny_0.1.3.tgz(r-4.3-emscripten)
DBTCShiny.pdf |DBTCShiny.html
DBTCShiny/json (API)

# Install 'DBTCShiny' in R:
install.packages('DBTCShiny', repos = c('https://rgyoung6.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rgyoung6/dbtcshiny/issues

On CRAN:

Conda:

3.74 score 1 scripts 495 downloads 1 exports 137 dependencies

Last updated 9 months agofrom:d302f3a306. Checks:1 OK, 6 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 02 2025
R-4.5-winNOTEMar 02 2025
R-4.5-macNOTEMar 02 2025
R-4.5-linuxNOTEMar 02 2025
R-4.4-winNOTEMar 02 2025
R-4.4-macNOTEMar 02 2025
R-4.3-winNOTEDec 02 2024

Exports:launchDBTCShiny

Dependencies:abindaskpassbase64encBHBiobaseBiocGenericsBiocParallelBiostringsbitbit64bitopsblobbslibcachemclicodetoolscolorspacecommonmarkcpp11crayoncrosstalkcurldada2data.tableDBIDBTCDelayedArraydeldirdigestDTevaluatefansifarverfastmapfontawesomeformatRfsfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomeInfoDbDataGenomicAlignmentsGenomicRangesggplot2gluegtablehighrhtmltoolshtmlwidgetshttpuvhttrhwriterinterpIRangesisobandjpegjquerylibjsonliteknitrlabelinglambda.rlaterlatticelatticeExtralazyevalleafletleaflet.extrasleaflet.providerslifecyclemagrittrMASSMatrixMatrixGenericsmatrixStatsmemoisemgcvmimemunsellnlmeopensslpbapplypillarpkgconfigplogrplyrpngpromisespwalignR.methodsS3R.ooR.utilsR6rappdirsrasterRColorBrewerRcppRcppEigenRcppParallelreshape2RhtslibrlangrmarkdownRsamtoolsRSQLiteS4ArraysS4VectorssassscalesshinyshinycssloadersshinydashboardshinyFilesshinyjsshinyWidgetsShortReadsnowsourcetoolsspSparseArraystringistringrSummarizedExperimentsystaxonomizrterratibbletinytexUCSC.utilsutf8vctrsviridisLitewithrxfunxtableXVectoryaml

Readme and manuals

Help Manual

Help pageTopics
Launch DBTCShinylaunchDBTCShiny