Package: DBTCShiny 0.1.3

DBTCShiny: Dada-BLAST-Taxon Assign-Condense Metabarcode Analysis 'shiny' Application

Metabarcoding analysis using the 'DBTC' package is implemented here using 'shiny' in an interactive graphical user interface to conduct Metabarcode analyses and visualize and filter results.

Authors:Robert G Young [aut, cre, cph]

DBTCShiny_0.1.3.tar.gz
DBTCShiny_0.1.3.zip(r-4.5)DBTCShiny_0.1.3.zip(r-4.4)DBTCShiny_0.1.3.zip(r-4.3)
DBTCShiny_0.1.3.tgz(r-4.4-any)DBTCShiny_0.1.3.tgz(r-4.3-any)
DBTCShiny_0.1.3.tar.gz(r-4.5-noble)DBTCShiny_0.1.3.tar.gz(r-4.4-noble)
DBTCShiny_0.1.3.tgz(r-4.4-emscripten)DBTCShiny_0.1.3.tgz(r-4.3-emscripten)
DBTCShiny.pdf |DBTCShiny.html
DBTCShiny/json (API)

# Install 'DBTCShiny' in R:
install.packages('DBTCShiny', repos = c('https://rgyoung6.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/rgyoung6/dbtcshiny/issues

On CRAN:

3.90 score 1 scripts 400 downloads 1 exports 138 dependencies

Last updated 6 months agofrom:d302f3a306. Checks:OK: 1 WARNING: 1 NOTE: 5. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 02 2024
R-4.5-winNOTENov 02 2024
R-4.5-linuxWARNINGNov 02 2024
R-4.4-winNOTENov 02 2024
R-4.4-macNOTENov 02 2024
R-4.3-winNOTENov 02 2024
R-4.3-macNOTEOct 03 2024

Exports:launchDBTCShiny

Dependencies:abindaskpassbase64encBHBiobaseBiocGenericsBiocParallelBiostringsbitbit64bitopsblobbslibcachemclicodetoolscolorspacecommonmarkcpp11crayoncrosstalkcurldada2data.tableDBIDBTCDelayedArraydeldirdigestDTevaluatefansifarverfastmapfontawesomeformatRfsfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomeInfoDbDataGenomicAlignmentsGenomicRangesggplot2gluegtablehighrhtmltoolshtmlwidgetshttpuvhttrhwriterinterpIRangesisobandjpegjquerylibjsonliteknitrlabelinglambda.rlaterlatticelatticeExtralazyevalleafletleaflet.extrasleaflet.providerslifecyclemagrittrMASSMatrixMatrixGenericsmatrixStatsmemoisemgcvmimemunsellnlmeopensslpbapplypillarpkgconfigplogrplyrpngpromisespwalignR.methodsS3R.ooR.utilsR6rappdirsrasterRColorBrewerRcppRcppEigenRcppParallelreshape2RhtslibrlangrmarkdownRsamtoolsRSQLiteS4ArraysS4VectorssassscalesshinyshinycssloadersshinydashboardshinyFilesshinyjsshinyWidgetsShortReadsnowsourcetoolsspSparseArraystringistringrSummarizedExperimentsystaxonomizrterratibbletinytexUCSC.utilsutf8vctrsviridisLitewithrxfunxtableXVectoryamlzlibbioc

Readme and manuals

Help Manual

Help pageTopics
Launch DBTCShinylaunchDBTCShiny