Package: DBTCShiny 0.1.3

DBTCShiny: Dada-BLAST-Taxon Assign-Condense Metabarcode Analysis 'shiny' Application

Metabarcoding analysis using the 'DBTC' package is implemented here using 'shiny' in an interactive graphical user interface to conduct Metabarcode analyses and visualize and filter results.

Authors:Robert G Young [aut, cre, cph]

DBTCShiny_0.1.3.tar.gz
DBTCShiny_0.1.3.zip(r-4.5)DBTCShiny_0.1.3.zip(r-4.4)DBTCShiny_0.1.3.zip(r-4.3)
DBTCShiny_0.1.3.tgz(r-4.4-any)DBTCShiny_0.1.3.tgz(r-4.3-any)
DBTCShiny_0.1.3.tar.gz(r-4.5-noble)DBTCShiny_0.1.3.tar.gz(r-4.4-noble)
DBTCShiny_0.1.3.tgz(r-4.4-emscripten)DBTCShiny_0.1.3.tgz(r-4.3-emscripten)
DBTCShiny.pdf |DBTCShiny.html✨
DBTCShiny/json (API)

Peer review:

Bug tracker:https://github.com/rgyoung6/dbtcshiny/issues

On CRAN:

1 exports 1.89 score 138 dependencies 1 scripts 664 downloads

Last updated 4 months agofrom:d302f3a306. Checks:OK: 1 NOTE: 6. Indexed: yes.

Exports:launchDBTCShiny

Dependencies:abindanytimeaskpassbase64encBHBiobaseBiocGenericsBiocParallelBiostringsbitbit64bitopsblobbslibcachemclicodetoolscolorspacecommonmarkcpp11crayoncrosstalkcurldada2data.tableDBIDBTCDelayedArraydeldirdigestDTevaluatefansifarverfastmapfontawesomeformatRfsfutile.loggerfutile.optionsGenomeInfoDbGenomeInfoDbDataGenomicAlignmentsGenomicRangesggplot2gluegtablehighrhtmltoolshtmlwidgetshttpuvhttrhwriterinterpIRangesisobandjpegjquerylibjsonliteknitrlabelinglambda.rlaterlatticelatticeExtralazyevalleafletleaflet.extrasleaflet.providerslifecyclemagrittrMASSMatrixMatrixGenericsmatrixStatsmemoisemgcvmimemunsellnlmeopensslpbapplypillarpkgconfigplogrplyrpngpromisespwalignR.methodsS3R.ooR.utilsR6rappdirsrasterRColorBrewerRcppRcppEigenRcppParallelreshape2RhtslibrlangrmarkdownRsamtoolsRSQLiteS4ArraysS4VectorssassscalesshinyshinycssloadersshinydashboardshinyFilesshinyjsshinyWidgetsShortReadsnowsourcetoolsspSparseArraystringistringrSummarizedExperimentsystaxonomizrterratibbletinytexUCSC.utilsutf8vctrsviridisLitewithrxfunxtableXVectoryamlzlibbioc